Hierarchy For Package htsjdk.samtools.cram.encoding

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • htsjdk.samtools.cram.encoding.AbstractBitCodec<T> (implements htsjdk.samtools.cram.encoding.BitCodec<T>)
    • htsjdk.samtools.cram.encoding.ByteArrayStopEncoding.ByteArrayStopCodec
  • htsjdk.samtools.cram.encoding.BetaIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.ByteArrayLenEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.ByteArrayStopEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.EncodingFactory
  • htsjdk.samtools.cram.encoding.ExternalByteArrayEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.ExternalByteEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.ExternalCompressor
  • htsjdk.samtools.cram.encoding.ExternalIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.ExternalLongEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.GammaIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.GolombIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.GolombLongEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.GolombRiceIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.NullEncoding<T> (implements htsjdk.samtools.cram.encoding.Encoding<T>)
  • htsjdk.samtools.cram.encoding.SubexponentialIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)

Interface Hierarchy

• htsjdk.samtools.cram.encoding.BitCodec<T>
• htsjdk.samtools.cram.encoding.Encoding<T>

Annotation Type Hierarchy

• htsjdk.samtools.cram.encoding.DataSeries (implements java.lang.annotation.Annotation)
• htsjdk.samtools.cram.encoding.DataSeriesMap (implements java.lang.annotation.Annotation)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • htsjdk.samtools.cram.encoding.DataSeriesType