htsjdk.samtools.cram.encoding

Class ByteArrayStopEncoding

java.lang.Object

htsjdk.samtools.cram.encoding.ByteArrayStopEncoding

All Implemented Interfaces:

Encoding<byte[]>

public class ByteArrayStopEncoding
extends java.lang.Object
implements Encoding<byte[]>

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	ByteArrayStopEncoding.ByteArrayStopCodec

Constructor Summary

Constructors

Constructor and Description
ByteArrayStopEncoding()

Method Summary

Modifier and Type	Method and Description
BitCodec<byte[]>	buildCodec(java.util.Map<java.lang.Integer,java.io.InputStream> inputMap, java.util.Map<java.lang.Integer,ExposedByteArrayOutputStream> outputMap)
void	fromByteArray(byte[] data)
EncodingID	id()
byte[]	toByteArray()
static EncodingParams	toParam(byte stopByte, int externalId)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ByteArrayStopEncoding

public ByteArrayStopEncoding()

Method Detail

id

public EncodingID id()

Specified by:

id in interface Encoding<byte[]>

toParam

public static EncodingParams toParam(byte stopByte,
                                     int externalId)

toByteArray

public byte[] toByteArray()

Specified by:

toByteArray in interface Encoding<byte[]>

fromByteArray

public void fromByteArray(byte[] data)

Specified by:

fromByteArray in interface Encoding<byte[]>

buildCodec

public BitCodec<byte[]> buildCodec(java.util.Map<java.lang.Integer,java.io.InputStream> inputMap,
                                   java.util.Map<java.lang.Integer,ExposedByteArrayOutputStream> outputMap)

Specified by:

buildCodec in interface Encoding<byte[]>