Hierarchy For Package htsjdk.tribble

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • htsjdk.tribble.AbstractFeatureCodec<FEATURE_TYPE,SOURCE> (implements htsjdk.tribble.FeatureCodec<FEATURE_TYPE,SOURCE>)
    • htsjdk.tribble.AsciiFeatureCodec<T>
  • htsjdk.tribble.AbstractFeatureReader<T,SOURCE> (implements htsjdk.tribble.FeatureReader<T>)
    • htsjdk.tribble.TabixFeatureReader<T,SOURCE>
    • htsjdk.tribble.TribbleIndexedFeatureReader<T,SOURCE>
  • htsjdk.tribble.AbstractFeatureReader.ComponentMethods
  • htsjdk.tribble.BinaryFeatureCodec<T> (implements htsjdk.tribble.FeatureCodec<FEATURE_TYPE,SOURCE>)
  • htsjdk.tribble.FeatureCodecHeader
  • htsjdk.tribble.SimpleFeature (implements htsjdk.tribble.Feature)
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • java.lang.RuntimeException
        • htsjdk.tribble.TribbleException
          • htsjdk.tribble.TribbleException.FeatureFileDoesntExist
          • htsjdk.tribble.TribbleException.InternalCodecException
          • htsjdk.tribble.TribbleException.InvalidDecodeLine
          • htsjdk.tribble.TribbleException.InvalidHeader
          • htsjdk.tribble.TribbleException.MalformedFeatureFile
          • htsjdk.tribble.TribbleException.TabixReaderFailure
          • htsjdk.tribble.TribbleException.UnableToCreateCorrectIndexType
          • htsjdk.tribble.TribbleException.UnableToReadIndexFile
  • htsjdk.tribble.Tribble

Interface Hierarchy

• java.lang.AutoCloseable
  • java.io.Closeable
    • htsjdk.samtools.util.CloseableIterator<T> (also extends java.util.Iterator<E>)
      • htsjdk.tribble.CloseableTribbleIterator<T> (also extends java.lang.Iterable<T>)
    • htsjdk.tribble.FeatureReader<T>
• htsjdk.tribble.FeatureCodec<FEATURE_TYPE,SOURCE>
• java.lang.Iterable<T>
  • htsjdk.tribble.CloseableTribbleIterator<T> (also extends htsjdk.samtools.util.CloseableIterator<T>)
• java.util.Iterator<E>
  • htsjdk.samtools.util.CloseableIterator<T> (also extends java.io.Closeable)
    • htsjdk.tribble.CloseableTribbleIterator<T> (also extends java.lang.Iterable<T>)
• htsjdk.samtools.util.Locatable
  • htsjdk.tribble.Feature
• htsjdk.tribble.NameAwareCodec