htsjdk.variant.variantcontext.filter

Interface VariantContextFilter

All Known Implementing Classes:

CompoundFilter, GenotypeQualityFilter, HeterozygosityFilter, JavascriptVariantFilter, PassingVariantFilter, SnpFilter

public interface VariantContextFilter

API for filtering VariantContexts

Method Summary

Modifier and Type	Method and Description
boolean	test(VariantContext record) Determines whether a VariantContext matches this filter

Method Detail

test

boolean test(VariantContext record)

Determines whether a VariantContext matches this filter

Parameters:

record - the VariantContext to evaluate

Returns:

true if the VariantContext matches the filter, otherwise false