public static class BCF2FieldWriter.FTGenotypesWriter extends BCF2FieldWriter.StaticallyTypeGenotypesWriter
BCF2FieldWriter.FTGenotypesWriter, BCF2FieldWriter.GenericSiteWriter, BCF2FieldWriter.GenotypesWriter, BCF2FieldWriter.GTWriter, BCF2FieldWriter.IGFGenotypesWriter, BCF2FieldWriter.IntegerTypeGenotypesWriter, BCF2FieldWriter.SiteWriter, BCF2FieldWriter.StaticallyTypeGenotypesWriter
Constructor and Description |
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FTGenotypesWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
Modifier and Type | Method and Description |
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void |
addGenotype(BCF2Encoder encoder,
VariantContext vc,
Genotype g) |
protected int |
numElements(VariantContext vc,
Genotype g) |
start
done, getField, getFieldEncoder, getHeader, toString
public FTGenotypesWriter(VCFHeader header, BCF2FieldEncoder fieldEncoder)
public void addGenotype(BCF2Encoder encoder, VariantContext vc, Genotype g) throws java.io.IOException
addGenotype
in class BCF2FieldWriter.GenotypesWriter
java.io.IOException
protected int numElements(VariantContext vc, Genotype g)
numElements
in class BCF2FieldWriter.GenotypesWriter