htsjdk.samtools.util

Class LocusImpl

java.lang.Object

htsjdk.samtools.util.LocusImpl

All Implemented Interfaces:

Locus

public class LocusImpl
extends java.lang.Object
implements Locus

Simple implementation of Locus interface for ease of passing as an arg and comparing with other Locus implementations.

Constructor Summary

Constructors

Constructor and Description
LocusImpl(int sequenceIndex, int position)

Method Summary

Modifier and Type	Method and Description
int	getPosition()
int	getSequenceIndex()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LocusImpl

public LocusImpl(int sequenceIndex,
                 int position)

Method Detail

getSequenceIndex

public int getSequenceIndex()

Specified by:

getSequenceIndex in interface Locus

getPosition

public int getPosition()

Specified by:

getPosition in interface Locus

Returns:

1-based position