htsjdk.samtools.cram.encoding.reader

Class DataReaderFactory.DataReaderWithStats<T>

java.lang.Object

htsjdk.samtools.cram.encoding.reader.DataReaderFactory.DataReaderWithStats<T>

All Implemented Interfaces:

DataReader<T>

Enclosing class:

DataReaderFactory

public static class DataReaderFactory.DataReaderWithStats<T>
extends java.lang.Object
implements DataReader<T>

Field Summary

Fields

Modifier and Type	Field and Description
long	nanos

Constructor Summary

Constructors

Constructor and Description
DataReaderWithStats(DataReader<T> delegate)

Method Summary

Modifier and Type	Method and Description
T	readData() Read a single object
T	readDataArray(int length) Read an array of specified length.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

nanos

public long nanos

Constructor Detail

DataReaderWithStats

public DataReaderWithStats(DataReader<T> delegate)

Method Detail

readData

public T readData()
           throws java.io.IOException

Description copied from interface: DataReader

Read a single object

Specified by:

readData in interface DataReader<T>

Returns:

an object or a primitive value read

Throws:

java.io.IOException - as per java IO contract

readDataArray

public T readDataArray(int length)
                throws java.io.IOException

Description copied from interface: DataReader

Read an array of specified length. Normally this is a byte array. The intent here is optimization: reading an array may be faster than reading elements one by one.

Specified by:

readDataArray in interface DataReader<T>

Parameters:

length - the length of the array to be read

Returns:

the array of objects

Throws:

java.io.IOException - as per java IO contract