htsjdk.samtools

Enum DuplicateScoringStrategy.ScoringStrategy

java.lang.Object

java.lang.Enum<DuplicateScoringStrategy.ScoringStrategy>

htsjdk.samtools.DuplicateScoringStrategy.ScoringStrategy

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<DuplicateScoringStrategy.ScoringStrategy>

Enclosing class:

DuplicateScoringStrategy

public static enum DuplicateScoringStrategy.ScoringStrategy
extends java.lang.Enum<DuplicateScoringStrategy.ScoringStrategy>

Enum Constant Summary

Enum Constants

Enum Constant and Description
RANDOM
SUM_OF_BASE_QUALITIES
TOTAL_MAPPED_REFERENCE_LENGTH

Method Summary

Modifier and Type	Method and Description
static DuplicateScoringStrategy.ScoringStrategy	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static DuplicateScoringStrategy.ScoringStrategy[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

SUM_OF_BASE_QUALITIES

public static final DuplicateScoringStrategy.ScoringStrategy SUM_OF_BASE_QUALITIES

TOTAL_MAPPED_REFERENCE_LENGTH

public static final DuplicateScoringStrategy.ScoringStrategy TOTAL_MAPPED_REFERENCE_LENGTH

RANDOM

public static final DuplicateScoringStrategy.ScoringStrategy RANDOM

Method Detail

values

public static DuplicateScoringStrategy.ScoringStrategy[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (DuplicateScoringStrategy.ScoringStrategy c : DuplicateScoringStrategy.ScoringStrategy.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static DuplicateScoringStrategy.ScoringStrategy valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null