public class FullBEDFeature.Exon
extends java.lang.Object
Constructor and Description |
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Exon(int start,
int end)
Constructs ...
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Modifier and Type | Method and Description |
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int |
getCdEnd()
Method description
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int |
getCdStart()
Method description
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int |
getCodingLength()
Method description
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int |
getNumber() |
java.lang.String |
getValueString(double position) |
void |
setCodingEnd(int codingEnd)
Method description
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void |
setCodingStart(int codingStart)
Method description
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void |
setMrnaBase(int base) |
void |
setNumber(int number) |
void |
setPhase(int phase)
Method description
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void |
setReadingFrame(int offset)
Method description
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void |
setUTR(boolean utr)
Flag indicating that the entire exon is the UTR.
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public void setMrnaBase(int base)
public void setUTR(boolean utr)
utr
- public void setCodingStart(int codingStart)
codingStart
- public void setCodingEnd(int codingEnd)
codingEnd
- public void setReadingFrame(int offset)
offset
- public void setPhase(int phase)
phase
- public int getCdStart()
public int getCdEnd()
public int getCodingLength()
public java.lang.String getValueString(double position)
public int getNumber()
public void setNumber(int number)