htsjdk.samtools.util

Class TestUtil

java.lang.Object

htsjdk.samtools.util.TestUtil

public class TestUtil
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	BASE_URL_FOR_HTTP_TESTS Base url where all test files for http tests are found

Constructor Summary

Constructors

Constructor and Description
TestUtil()

Method Summary

Modifier and Type	Method and Description
static java.io.File	getTempDirecory(java.lang.String prefix, java.lang.String suffix) Deprecated. Use properly spelled method. getTempDirectory(java.lang.String, java.lang.String)
static java.io.File	getTempDirectory(java.lang.String prefix, java.lang.String suffix)
static void	recursiveDelete(java.io.File directory) Little test utility to help tests that create multiple levels of subdirectories clean up after themselves.
static <T extends java.io.Serializable> T	serializeAndDeserialize(T input) Serialize and Deserialize an object Useful for testing if serialization is correctly handled for a class.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

BASE_URL_FOR_HTTP_TESTS

public static final java.lang.String BASE_URL_FOR_HTTP_TESTS

Base url where all test files for http tests are found

See Also:

Constant Field Values

Constructor Detail

TestUtil

public TestUtil()

Method Detail

getTempDirectory

public static java.io.File getTempDirectory(java.lang.String prefix,
                                            java.lang.String suffix)

getTempDirecory

@Deprecated
public static java.io.File getTempDirecory(java.lang.String prefix,
                                                       java.lang.String suffix)

Deprecated. Use properly spelled method. getTempDirectory(java.lang.String, java.lang.String)

recursiveDelete

public static void recursiveDelete(java.io.File directory)

Little test utility to help tests that create multiple levels of subdirectories clean up after themselves.

Parameters:

directory - The directory to be deleted (along with its subdirectories)

serializeAndDeserialize

public static <T extends java.io.Serializable> T serializeAndDeserialize(T input)
                                                                  throws java.io.IOException,
                                                                         java.lang.ClassNotFoundException

Serialize and Deserialize an object Useful for testing if serialization is correctly handled for a class.

Type Parameters:

T - any Serializable type

Parameters:

input - an object to serialize and then deserialize

Returns:

a copy of the initial object

Throws:

java.io.IOException

java.lang.ClassNotFoundException