htsjdk.samtools.util

Class BlockCompressedStreamConstants

java.lang.Object

htsjdk.samtools.util.BlockCompressedStreamConstants

public class BlockCompressedStreamConstants
extends java.lang.Object

Constants shared by BlockCompressed{Input,Output}Stream classes

Field Summary

Fields

Modifier and Type	Field and Description
static byte	BGZF_ID1
static byte	BGZF_ID2
static byte	BGZF_LEN
static int	BLOCK_FOOTER_LENGTH
static int	BLOCK_HEADER_LENGTH
static int	BLOCK_LENGTH_OFFSET
static int	DEFAULT_COMPRESSION_LEVEL
static int	DEFAULT_UNCOMPRESSED_BLOCK_SIZE
static byte[]	EMPTY_GZIP_BLOCK
static byte[]	GZIP_BLOCK_PREAMBLE
static byte	GZIP_CM_DEFLATE
static int	GZIP_FLG
static byte	GZIP_ID1
static int	GZIP_ID2
static int	GZIP_OS_UNKNOWN
static int	GZIP_OVERHEAD
static int	GZIP_XFL
static short	GZIP_XLEN
static int	MAX_COMPRESSED_BLOCK_SIZE
static int	NO_COMPRESSION_OVERHEAD

Constructor Summary

Constructors

Constructor and Description
BlockCompressedStreamConstants()

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

BLOCK_HEADER_LENGTH

public static final int BLOCK_HEADER_LENGTH

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Constant Field Values

BLOCK_LENGTH_OFFSET

public static final int BLOCK_LENGTH_OFFSET

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Constant Field Values

BLOCK_FOOTER_LENGTH

public static final int BLOCK_FOOTER_LENGTH

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Constant Field Values

MAX_COMPRESSED_BLOCK_SIZE

public static final int MAX_COMPRESSED_BLOCK_SIZE

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Constant Field Values

GZIP_OVERHEAD

public static final int GZIP_OVERHEAD

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Constant Field Values

NO_COMPRESSION_OVERHEAD

public static final int NO_COMPRESSION_OVERHEAD

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Constant Field Values

DEFAULT_UNCOMPRESSED_BLOCK_SIZE

public static final int DEFAULT_UNCOMPRESSED_BLOCK_SIZE

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Constant Field Values

GZIP_ID1

public static final byte GZIP_ID1

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Constant Field Values

GZIP_ID2

public static final int GZIP_ID2

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Constant Field Values

GZIP_FLG

public static final int GZIP_FLG

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Constant Field Values

GZIP_XFL

public static final int GZIP_XFL

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Constant Field Values

GZIP_XLEN

public static final short GZIP_XLEN

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Constant Field Values

GZIP_CM_DEFLATE

public static final byte GZIP_CM_DEFLATE

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Constant Field Values

DEFAULT_COMPRESSION_LEVEL

public static final int DEFAULT_COMPRESSION_LEVEL

GZIP_OS_UNKNOWN

public static final int GZIP_OS_UNKNOWN

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Constant Field Values

BGZF_ID1

public static final byte BGZF_ID1

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Constant Field Values

BGZF_ID2

public static final byte BGZF_ID2

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Constant Field Values

BGZF_LEN

public static final byte BGZF_LEN

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Constant Field Values

EMPTY_GZIP_BLOCK

public static final byte[] EMPTY_GZIP_BLOCK

GZIP_BLOCK_PREAMBLE

public static final byte[] GZIP_BLOCK_PREAMBLE

Constructor Detail

BlockCompressedStreamConstants

public BlockCompressedStreamConstants()