Hierarchy For Package htsjdk.samtools.cram.structure

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • htsjdk.samtools.cram.structure.AlignmentSpan
  • htsjdk.samtools.cram.structure.Block
  • htsjdk.samtools.cram.structure.CompressionHeader
  • htsjdk.samtools.cram.structure.Container
  • htsjdk.samtools.cram.structure.ContainerIO
  • htsjdk.samtools.cram.structure.CramCompressionRecord
  • htsjdk.samtools.cram.structure.CramCompressionRecord.BAM_FLAGS
  • htsjdk.samtools.cram.structure.CramHeader
  • htsjdk.samtools.cram.structure.EncodingParams
  • htsjdk.samtools.cram.structure.ReadTag (implements java.lang.Comparable<T>)
  • htsjdk.samtools.cram.structure.Slice
  • htsjdk.samtools.cram.structure.SubstitutionMatrix

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • htsjdk.samtools.cram.structure.BlockCompressionMethod
    • htsjdk.samtools.cram.structure.BlockContentType
    • htsjdk.samtools.cram.structure.EncodingID
    • htsjdk.samtools.cram.structure.EncodingKey